EnhancerDB
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  3. rs190074678[chr5:148282239]
Enhancers that have rs190074678[chr5:148282239]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 148282079 148299015 enh22690
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs190074678[chr5:148282239]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 148282221 148282242 IRF1 JASPAR yes 66771510
chr5 148282227 148282242 FOXP1 JASPAR yes 66771513
chr5 148282228 148282239 FOXP2 JASPAR yes 66771514
chr5 148282234 148282244 MZF1 JASPAR yes 66771516
chr5 148282235 148282249 EBF1 JASPAR yes 66771517
chr5 148282236 148282247 EBF1 JASPAR yes 66771518
chr5 148282236 148282250 PLAG1 JASPAR yes 66771519
chr5 148282237 148282248 EBF1 JASPAR yes 66771520
Genes associated with rs190074678[chr5:148282239], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More