EnhancerDB
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  3. rs190117025[chr1:153500016]
Enhancers that have rs190117025[chr1:153500016]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 153476105 153501977 enh12269
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs190117025[chr1:153500016]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 153499821 153500110 TCF7L2 GTRD no Colon (HCT116) 21339717
chr1 153499833 153500157 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21339718
chr1 153499843 153500233 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21339719
chr1 153500007 153500019 INSM1 JASPAR yes 32257536
chr1 153500007 153500019 TFAP2A JASPAR yes 32257537
chr1 153500014 153500024 MAX JASPAR yes 32257538
Genes associated with rs190117025[chr1:153500016], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More