EnhancerDB
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  3. rs190132669[chr1:52101354]
Enhancers that have rs190132669[chr1:52101354]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52099919 52117655 enh11848
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Uterus Stomach Brain (SK-N-SH) Ovary Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs190132669[chr1:52101354]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52101348 52101356 ISX JASPAR yes 28857133
chr1 52101348 52101356 LHX9 JASPAR yes 28857134
chr1 52101348 52101356 LMX1B JASPAR yes 28857135
chr1 52101348 52101356 PRRX1 JASPAR yes 28857136
chr1 52101348 52101356 RAX2 JASPAR yes 28857137
chr1 52101348 52101356 SHOX JASPAR yes 28857138
chr1 52101348 52101356 UNCX JASPAR yes 28857139
Genes associated with rs190132669[chr1:52101354], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More