EnhancerDB
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  3. rs190133164[chr17:25899859]
Enhancers that have rs190133164[chr17:25899859]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25884725 25904399 enh17065
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Blood (T-cell) Astrocyte Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Spleen Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
chr17 25898536 25901861 vista677
VISTA
Transcript factors that have rs190133164[chr17:25899859]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25899849 25899861 TFAP2A JASPAR yes 9094
chr17 25899849 25899861 TFAP2B JASPAR yes 9095
chr17 25899849 25899861 TFAP2C JASPAR yes 9096
chr17 25899849 25899861 TFAP2A JASPAR yes 53647252
chr17 25899849 25899861 TFAP2B JASPAR yes 53647253
chr17 25899849 25899861 TFAP2C JASPAR yes 53647254
chr17 25899856 25899860 LFA1 TRANSFAC yes 9097
chr17 25899856 25899860 LFA1 TRANSFAC yes 53647255
Genes associated with rs190133164[chr17:25899859], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More