EnhancerDB
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  3. rs190220598[chr16:14485624]
Enhancers that have rs190220598[chr16:14485624]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 14436207 14505799 enh3905
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs190220598[chr16:14485624]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 14484687 14488649 ZNF274 GTRD no Liver (HepG2) 21693044
chr16 14484853 14485745 ZNF274 GTRD no Cervix (HeLa-S3) 21693045
chr16 14484867 14485654 ZNF274 GTRD no Cervix (HeLa-S3) 21693047
chr16 14484900 14485771 ZNF274 GTRD no Cervix (HeLa-S3) 21693048
chr16 14484954 14485822 ZNF274 GTRD no Cervix (HeLa-S3) 21693050
chr16 14484971 14485782 ZNF274 GTRD no Cervix (HeLa-S3) 21693051
chr16 14484991 14488681 ZNF274 GTRD no Liver (HepG2) 21693052
chr16 14485062 14485782 ZNF274 GTRD no Cervix (HeLa-S3) 21693054
chr16 14485068 14485762 ZNF274 GTRD no Liver (HepG2) 21693055
chr16 14485088 14485917 ZNF143 GTRD no Epithelial (MCF-7) 21693057
chr16 14485102 14485799 ZNF143 GTRD no Epithelial (MCF-7) 21693058
chr16 14485130 14485814 ZNF143 GTRD no Epithelial (MCF-7) 21693060
chr16 14485170 14485649 ZNF274 GTRD no Liver (HepG2) 21693062
chr16 14485295 14485652 ZNF143 GTRD no Epithelial (MCF-7) 21693064
chr16 14485374 14485627 ZNF143 GTRD no Epithelial (MCF-7) 21693065
chr16 14485618 14485632 ONECUT2 JASPAR yes 9693108
chr16 14485618 14485632 ONECUT3 JASPAR yes 9693109
chr16 14485624 14485628 YY1 TRANSFAC yes 9693110
Genes associated with rs190220598[chr16:14485624], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More