EnhancerDB
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  3. rs190245888[chr16:14472458]
Enhancers that have rs190245888[chr16:14472458]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 14436207 14505799 enh3905
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs190245888[chr16:14472458]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 14471969 14472539 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21692869
chr16 14471969 14472539 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108184050
chr16 14472015 14472695 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21692870
chr16 14472015 14472695 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108184051
chr16 14472049 14472513 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21692871
chr16 14472049 14472513 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108184052
chr16 14472051 14472575 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21692872
chr16 14472051 14472575 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108184053
chr16 14472092 14472596 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21692873
chr16 14472092 14472596 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108184054
chr16 14472129 14472509 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21692876
chr16 14472129 14472509 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108184057
chr16 14472129 14472784 TFAP2C UCSC Txn Factor no Conserved 108184058
chr16 14472147 14472490 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21692877
chr16 14472147 14472490 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108184059
chr16 14472147 14472967 TFAP2A UCSC Txn Factor no Conserved 108184060
chr16 14472195 14472705 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21692879
chr16 14472195 14472705 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108184062
chr16 14472201 14472677 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21692880
chr16 14472201 14472677 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108184063
chr16 14472210 14472600 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108184064
chr16 14472232 14472608 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21692881
chr16 14472232 14472608 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108184065
chr16 14472249 14472759 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21692882
chr16 14472249 14472759 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108184066
chr16 14472268 14472784 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21692883
chr16 14472268 14472784 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108184067
chr16 14472282 14472678 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21692884
chr16 14472282 14472678 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108184068
chr16 14472284 14472964 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21692885
chr16 14472284 14472964 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108184069
chr16 14472325 14472975 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21692886
chr16 14472325 14472975 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108184070
chr16 14472437 14472967 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21692887
chr16 14472440 14472944 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21692888
chr16 14472458 14472473 LEF1 JASPAR yes 9691209
Genes associated with rs190245888[chr16:14472458], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More