EnhancerDB
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  3. rs190252756[chr6:40965484]
Enhancers that have rs190252756[chr6:40965484]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 40961545 40969515 enh38993
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Large Intestine Esophagus Astrocyte Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Stomach
chr6 40965087 40965613 vista51888
VISTA
Transcript factors that have rs190252756[chr6:40965484]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 40965190 40965766 TCF7L2 UCSC Txn Factor no Conserved 108540153
chr6 40965219 40965659 EP300 UCSC Txn Factor no Conserved 108540154
chr6 40965253 40965580 JUND UCSC Txn Factor no Conserved 108540155
chr6 40965267 40965559 FOSL2 UCSC Txn Factor no Conserved 108540156
chr6 40965288 40965653 TEAD4 UCSC Txn Factor no Conserved 108540157
chr6 40965320 40965676 NR3C1 UCSC Txn Factor no Conserved 108540158
chr6 40965472 40965486 SPIC JASPAR yes 70361503
chr6 40965472 40965486 SPIC JASPAR yes 101626877
chr6 40965480 40965490 HOXA13 JASPAR yes 70361504
chr6 40965480 40965490 HOXC10 JASPAR yes 70361505
chr6 40965480 40965490 HOXD13 JASPAR yes 70361506
chr6 40965480 40965490 HOXA13 JASPAR yes 101626878
chr6 40965480 40965490 HOXC10 JASPAR yes 101626879
chr6 40965480 40965490 HOXD13 JASPAR yes 101626880
chr6 40965480 40965491 HOXC11 JASPAR yes 70361507
chr6 40965480 40965491 HOXC12 JASPAR yes 70361508
chr6 40965480 40965491 HOXC13 JASPAR yes 70361509
chr6 40965480 40965491 HOXD12 JASPAR yes 70361510
chr6 40965480 40965491 HOXC11 JASPAR yes 101626881
chr6 40965480 40965491 HOXC12 JASPAR yes 101626882
chr6 40965480 40965491 HOXC13 JASPAR yes 101626883
chr6 40965480 40965491 HOXD12 JASPAR yes 101626884
chr6 40965481 40965490 CDX1 JASPAR yes 70361511
chr6 40965481 40965490 CDX1 JASPAR yes 101626885
chr6 40965481 40965492 CDX2 JASPAR yes 70361512
chr6 40965481 40965492 CDX2 JASPAR yes 101626886
Genes associated with rs190252756[chr6:40965484], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More