EnhancerDB
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  3. rs190327546[chr17:70423837]
Enhancers that have rs190327546[chr17:70423837]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs190327546[chr17:70423837]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70423271 70424174 ZNF274 GTRD no Blood (GM12878) 21785135
chr17 70423271 70424174 ZNF274 GTRD no Blood (GM12878) 108290146
chr17 70423409 70424127 ZBTB33 GTRD no Brain (SK-N-SH) 21785137
chr17 70423409 70424127 ZBTB33 GTRD no Brain (SK-N-SH) 108290148
chr17 70423414 70424270 ZBTB33 GTRD no Brain (SK-N-SH) 21785138
chr17 70423414 70424270 ZBTB33 GTRD no Brain (SK-N-SH) 108290149
chr17 70423429 70424044 ZBTB33 GTRD no Brain (SK-N-SH) 21785140
chr17 70423429 70424044 ZBTB33 GTRD no Brain (SK-N-SH) 108290151
chr17 70423459 70424102 ZBTB33 GTRD no Brain (SK-N-SH) 21785142
chr17 70423459 70424102 ZBTB33 GTRD no Brain (SK-N-SH) 108290153
chr17 70423461 70424204 ZNF274 GTRD no Blood (GM12878) 21785143
chr17 70423461 70424204 ZNF274 GTRD no Blood (GM12878) 108290154
chr17 70423651 70423950 ZBTB33 GTRD no Brain (SK-N-SH) 21785144
chr17 70423750 70424013 ZNF274 GTRD no Blood (GM12878) 21785145
chr17 70423830 70423841 GCM1 JASPAR yes 55787090
chr17 70423832 70423843 TFAP2B JASPAR yes 55787091
Genes associated with rs190327546[chr17:70423837], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More