EnhancerDB
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  3. rs190343406[chr1:178616635]
Enhancers that have rs190343406[chr1:178616635]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178606845 178636895 enh759
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Ovary Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs190343406[chr1:178616635]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178616620 178616635 FOXP1 JASPAR yes 33432969
chr1 178616623 178616638 FOXA1 JASPAR yes 33432970
chr1 178616624 178616636 FOXI1 JASPAR yes 33432971
chr1 178616624 178616639 FOXP1 JASPAR yes 33432972
chr1 178616625 178616637 FOXC2 JASPAR yes 33432973
chr1 178616625 178616639 ONECUT2 JASPAR yes 33432974
chr1 178616625 178616639 ONECUT3 JASPAR yes 33432975
chr1 178616626 178616637 FOXB1 JASPAR yes 33432976
chr1 178616626 178616637 FOXC1 JASPAR yes 33432977
chr1 178616629 178616645 POU4F2 JASPAR yes 33432979
chr1 178616629 178616645 POU4F3 JASPAR yes 33432980
chr1 178616631 178616635 YY1 TRANSFAC yes 33432981
chr1 178616631 178616645 POU4F1 JASPAR yes 33432982
chr1 178616631 178616646 FOXP1 JASPAR yes 33432983
chr1 178616633 178616649 POU4F3 JASPAR yes 33432984
chr1 178616634 178616649 MEF2A JASPAR yes 33432985
chr1 178616635 178616647 FOXI1 JASPAR yes 33432986
chr1 178616635 178616649 POU4F1 JASPAR yes 33432987
chr1 178616635 178616650 MEF2C JASPAR yes 33432988
Genes associated with rs190343406[chr1:178616635], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More