EnhancerDB
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  3. rs190394669[chr17:1901289]
Enhancers that have rs190394669[chr17:1901289]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 1888491 1923135 enh16929
Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs190394669[chr17:1901289]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 1901276 1901291 TFAP2A JASPAR yes 52714685
chr17 1901276 1901291 TFAP2C JASPAR yes 52714686
chr17 1901277 1901289 INSM1 JASPAR yes 52714687
chr17 1901277 1901289 TFAP2A JASPAR yes 52714688
chr17 1901277 1901289 TFAP2B JASPAR yes 52714689
chr17 1901277 1901289 TFAP2C JASPAR yes 52714690
chr17 1901282 1901289 SP1 TRANSFAC yes 52714692
chr17 1901282 1901292 SP1 JASPAR yes 52714693
chr17 1901283 1901291 SP1 TRANSFAC yes 52714694
chr17 1901284 1901289 SP1 TRANSFAC yes 52714695
chr17 1901285 1901290 SP1 TRANSFAC yes 52714696
chr17 1901285 1901294 THAP1 JASPAR yes 52714697
chr17 1901288 1901292 LFA1 TRANSFAC yes 52714698
Genes associated with rs190394669[chr17:1901289], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More