EnhancerDB
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  3. rs190401197[chr17:25874880]
Enhancers that have rs190401197[chr17:25874880]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25838865 25883455 enh17064
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs190401197[chr17:25874880]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25874870 25874880 REL JASPAR yes 53644042
chr17 25874879 25874891 HES5 JASPAR yes 53644043
chr17 25874879 25874891 HES7 JASPAR yes 53644044
chr17 25874879 25874899 TP63 JASPAR yes 53644045
chr17 25874880 25874898 TP73 JASPAR yes 53644046
Genes associated with rs190401197[chr17:25874880], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More