EnhancerDB
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Enhancers that have rs190418888[chr1:201670166]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201670008 201708415 enh12526
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Spleen Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs190418888[chr1:201670166]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201670145 201670166 IRF1 JASPAR yes 34521640
chr1 201670149 201670170 IRF1 JASPAR yes 34521643
chr1 201670153 201670167 SPIC JASPAR yes 34521645
chr1 201670153 201670167 STAT1 JASPAR yes 34521646
chr1 201670153 201670168 PRDM1 JASPAR yes 34521647
chr1 201670153 201670168 STAT2 JASPAR yes 34521648
chr1 201670153 201670174 IRF1 JASPAR yes 34521649
chr1 201670154 201670175 IRF1 JASPAR yes 34521650
chr1 201670159 201670174 FOXP1 JASPAR yes 34521651
chr1 201670160 201670181 IRF1 JASPAR yes 34521652
Genes associated with rs190418888[chr1:201670166], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More