EnhancerDB
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  3. rs190421920[chr17:62962360]
Enhancers that have rs190421920[chr17:62962360]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs190421920[chr17:62962360]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62961063 62967368 ZNF143 GTRD no Epithelial (MCF-7) 21780063
chr17 62961063 62967368 ZNF143 GTRD no Epithelial (MCF-7) 108282993
chr17 62961316 62966180 ZNF143 GTRD no Epithelial (MCF-7) 21780064
chr17 62961528 62967335 ZNF143 GTRD no Epithelial (MCF-7) 21780066
chr17 62961528 62967335 ZNF143 GTRD no Epithelial (MCF-7) 108282994
chr17 62961564 62966206 ZNF143 GTRD no Epithelial (MCF-7) 21780067
chr17 62961564 62966206 ZNF143 GTRD no Epithelial (MCF-7) 108282995
chr17 62961576 62966140 ZNF143 GTRD no Epithelial (MCF-7) 21780068
chr17 62961579 62966158 ZNF143 GTRD no Epithelial (MCF-7) 21780069
chr17 62961630 62967520 ZNF143 GTRD no Epithelial (MCF-7) 21780070
chr17 62961630 62967520 ZNF143 GTRD no Epithelial (MCF-7) 108282996
chr17 62961659 62966014 ZNF143 GTRD no Epithelial (MCF-7) 21780071
chr17 62961682 62966103 ZNF143 GTRD no Epithelial (MCF-7) 21780072
chr17 62961709 62962433 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21780074
chr17 62961710 62966032 ZNF143 GTRD no Epithelial (MCF-7) 21780075
chr17 62961734 62966163 ZNF143 GTRD no Epithelial (MCF-7) 21780076
chr17 62961738 62962573 ZNF143 GTRD no Epithelial (MCF-7) 21780077
chr17 62961786 62967558 ZNF143 GTRD no Epithelial (MCF-7) 21780079
chr17 62961786 62967558 ZNF143 GTRD no Epithelial (MCF-7) 108282997
chr17 62961787 62962363 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21780080
chr17 62961787 62962383 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21780081
chr17 62961808 62966060 ZNF143 GTRD no Epithelial (MCF-7) 21780082
chr17 62961822 62962438 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21780083
chr17 62961826 62968116 ZNF143 GTRD no Epithelial (MCF-7) 21780084
chr17 62961826 62968116 ZNF143 GTRD no Epithelial (MCF-7) 108282998
chr17 62961833 62962596 ZNF143 GTRD no Epithelial (MCF-7) 21780086
chr17 62961838 62962590 ZNF143 GTRD no Epithelial (MCF-7) 21780088
chr17 62961857 62962513 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21780091
chr17 62961880 62962424 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21780093
chr17 62961916 62962436 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21780099
chr17 62961916 62962440 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21780100
chr17 62962003 62962507 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21780111
chr17 62962106 62962516 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21780121
chr17 62962116 62962640 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21780122
chr17 62962137 62962427 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21780123
chr17 62962147 62962397 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21780124
chr17 62962156 62962386 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21780125
chr17 62962157 62962417 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21780126
chr17 62962158 62962382 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21780127
chr17 62962162 62962406 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21780128
chr17 62962168 62962384 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21780129
chr17 62962170 62962360 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21780130
Genes associated with rs190421920[chr17:62962360], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More