EnhancerDB
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  3. rs190483534[chr1:203488020]
Enhancers that have rs190483534[chr1:203488020]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203471885 203497995 enh12556
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs190483534[chr1:203488020]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203486453 203488469 ZNF143 GTRD no Epithelial (MCF-7) 21369131
chr1 203486461 203488504 ZNF143 GTRD no Epithelial (MCF-7) 21369132
chr1 203486475 203488890 ZNF143 GTRD no Epithelial (MCF-7) 21369133
chr1 203486491 203488398 ZNF143 GTRD no Epithelial (MCF-7) 21369134
chr1 203486535 203488632 ZNF143 GTRD no Epithelial (MCF-7) 21369135
chr1 203486536 203488874 ZNF143 GTRD no Epithelial (MCF-7) 21369136
chr1 203486545 203488921 ZNF143 GTRD no Epithelial (MCF-7) 21369137
chr1 203486562 203488618 ZNF143 GTRD no Epithelial (MCF-7) 21369138
chr1 203486575 203488349 TCF7L2 GTRD no Colon (HCT116) 21369139
chr1 203486607 203488312 ZNF143 GTRD no Epithelial (MCF-7) 21369140
chr1 203486610 203488268 TCF7L2 GTRD no Colon (HCT116) 21369141
chr1 203486657 203488451 ZNF274 GTRD no Cervix (HeLa-S3) 21369144
chr1 203486657 203488644 ZNF274 GTRD no Cervix (HeLa-S3) 21369145
chr1 203486710 203488890 TCF7L2 GTRD no Colon (HCT116) 21369146
chr1 203486722 203488615 ZNF143 GTRD no Epithelial (MCF-7) 21369147
chr1 203486771 203488661 ZNF143 GTRD no Epithelial (MCF-7) 21369148
chr1 203486810 203488515 ZNF143 GTRD no Epithelial (MCF-7) 21369149
chr1 203486812 203488679 ZNF143 GTRD no Epithelial (MCF-7) 21369150
chr1 203486864 203488639 ZNF143 GTRD no Epithelial (MCF-7) 21369151
chr1 203486884 203488425 ZNF143 GTRD no Epithelial (MCF-7) 21369152
chr1 203486904 203488210 ZNF143 GTRD no Epithelial (MCF-7) 21369153
chr1 203486921 203488654 ZNF143 GTRD no Epithelial (MCF-7) 21369154
chr1 203486949 203488784 ZNF143 GTRD no Epithelial (MCF-7) 21369155
chr1 203486978 203488066 ZNF143 GTRD no Epithelial (MCF-7) 21369156
chr1 203486997 203488379 ZNF143 GTRD no Epithelial (MCF-7) 21369157
chr1 203486999 203488303 ZNF143 GTRD no Epithelial (MCF-7) 21369158
chr1 203487044 203488275 ZNF274 GTRD no Cervix (HeLa-S3) 21369159
chr1 203487061 203488505 TCF7L2 GTRD no Colon (HCT116) 21369160
chr1 203487073 203488480 ZNF143 GTRD no Epithelial (MCF-7) 21369161
chr1 203487077 203488475 ZNF143 GTRD no Epithelial (MCF-7) 21369162
chr1 203487090 203488378 ZNF274 GTRD no Cervix (HeLa-S3) 21369163
chr1 203487120 203488249 ZNF274 GTRD no Cervix (HeLa-S3) 21369164
chr1 203487121 203488548 TCF7L2 GTRD no Colon (HCT116) 21369165
chr1 203487122 203488635 ZNF143 GTRD no Epithelial (MCF-7) 21369166
chr1 203487149 203488678 TCF7L2 GTRD no Colon (HCT116) 21369167
chr1 203487156 203488166 ZBTB33 GTRD no Brain (SK-N-SH) 21369168
chr1 203487170 203488300 ZBTB33 GTRD no Brain (SK-N-SH) 21369169
chr1 203487182 203488239 ZNF143 GTRD no Epithelial (MCF-7) 21369170
chr1 203487203 203488342 TCF7L2 GTRD no Colon (HCT116) 21369171
chr1 203487209 203488485 CTCF GTRD no Spleen 21369172
chr1 203487218 203488193 TCF7L2 GTRD no Colon (HCT116) 21369173
chr1 203487219 203488340 ZNF143 GTRD no Epithelial (MCF-7) 21369174
chr1 203487239 203488173 ZBTB33 GTRD no Brain (SK-N-SH) 21369175
chr1 203487258 203488188 ZNF274 GTRD no Cervix (HeLa-S3) 21369177
chr1 203487267 203488232 ZNF274 GTRD no Cervix (HeLa-S3) 21369178
chr1 203487274 203488415 ZNF143 GTRD no Epithelial (MCF-7) 21369179
chr1 203487275 203488306 TCF7L2 GTRD no Colon (HCT116) 21369180
chr1 203487275 203488345 ZNF274 GTRD no Cervix (HeLa-S3) 21369181
chr1 203487280 203488198 ZNF274 GTRD no Cervix (HeLa-S3) 21369182
chr1 203487313 203488151 ZBTB33 GTRD no Brain (SK-N-SH) 21369183
chr1 203487316 203488164 ZNF274 GTRD no Cervix (HeLa-S3) 21369184
chr1 203487345 203488176 ZBTB33 GTRD no Brain (SK-N-SH) 21369185
chr1 203487349 203488167 ZNF274 GTRD no Cervix (HeLa-S3) 21369186
chr1 203487352 203488156 ZNF143 GTRD no Epithelial (MCF-7) 21369187
chr1 203487365 203488202 ZBTB33 GTRD no Brain (SK-N-SH) 21369188
chr1 203487373 203488127 ZBTB33 GTRD no Brain (SK-N-SH) 21369189
chr1 203487385 203488159 ZNF274 GTRD no Cervix (HeLa-S3) 21369190
chr1 203487385 203488203 TCF7L2 GTRD no Colon (HCT116) 21369191
chr1 203487403 203488094 ZBTB33 GTRD no Brain (SK-N-SH) 21369192
chr1 203487407 203488159 TCF7L2 GTRD no Colon (HCT116) 21369193
chr1 203487435 203488120 ZNF274 GTRD no Cervix (HeLa-S3) 21369194
chr1 203487463 203488163 ZBTB33 GTRD no Brain (SK-N-SH) 21369195
chr1 203488017 203488037 TP63 JASPAR yes 34634707
chr1 203488020 203488035 TP53 JASPAR yes 34634708
Genes associated with rs190483534[chr1:203488020], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More