EnhancerDB
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  3. rs190506227[chr17:75383828]
Enhancers that have rs190506227[chr17:75383828]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 75373666 75445575 enh4617
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs190506227[chr17:75383828]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 75382725 75385911 ZNF143 GTRD no Epithelial (MCF-7) 21790292
chr17 75382725 75385911 ZNF143 GTRD no Epithelial (MCF-7) 108298568
chr17 75382725 75385911 ZNF143 GTRD no Epithelial (MCF-7) 108298569
chr17 75383824 75383829 SP1 TRANSFAC yes 56075725
Genes associated with rs190506227[chr17:75383828], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More