EnhancerDB
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  3. rs190506246[chr12:96842252]
Enhancers that have rs190506246[chr12:96842252]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96795782 96855361 enh14922
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Prostate (RWPE1) Muscle (A673) Heart
chr12 96842223 96842407 vista14581
VISTA
Transcript factors that have rs190506246[chr12:96842252]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96841933 96842573 POLR2A UCSC Txn Factor no Conserved 108053414
chr12 96842049 96842405 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21567775
chr12 96842049 96842405 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108053415
chr12 96842063 96842417 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21567776
chr12 96842063 96842417 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108053416
chr12 96842079 96842455 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21567777
chr12 96842079 96842455 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108053417
chr12 96842106 96842502 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21567778
chr12 96842106 96842502 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108053418
chr12 96842149 96842469 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21567779
chr12 96842149 96842469 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108053419
chr12 96842186 96842516 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21567780
chr12 96842186 96842516 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108053420
chr12 96842248 96842252 H1TF2 TRANSFAC yes 82461955
chr12 96842248 96842252 NFE TRANSFAC yes 82461956
chr12 96842248 96842252 SRF TRANSFAC yes 82461957
chr12 96842248 96842252 H1TF2 TRANSFAC yes 123072567
chr12 96842248 96842252 NFE TRANSFAC yes 123072568
chr12 96842248 96842252 SRF TRANSFAC yes 123072569
Genes associated with rs190506246[chr12:96842252], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More