EnhancerDB
  1. Home
  2. SNP
  3. rs190528520[chr1:25065347]
Enhancers that have rs190528520[chr1:25065347]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs190528520[chr1:25065347]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25065334 25065351 ESR1 JASPAR yes 27525794
chr1 25065341 25065351 NFIA JASPAR yes 27525795
chr1 25065342 25065351 NFIX JASPAR yes 27525796
chr1 25065343 25065349 NFIC JASPAR yes 27525797
Genes associated with rs190528520[chr1:25065347], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More