EnhancerDB
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  3. rs190549543[chr12:124984118]
Enhancers that have rs190549543[chr12:124984118]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 124961018 125019902 enh2673
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs190549543[chr12:124984118]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 124984101 124984120 CTCF JASPAR yes 124385201
chr12 124984109 124984123 GLIS2 JASPAR yes 124385206
chr12 124984109 124984123 GLIS3 JASPAR yes 124385207
chr12 124984113 124984123 ZNF740 JASPAR yes 124385209
Genes associated with rs190549543[chr12:124984118], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More