EnhancerDB
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  3. rs190556722[chr17:56079443]
Enhancers that have rs190556722[chr17:56079443]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 56068785 56080363 enh4497
Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs190556722[chr17:56079443]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56079427 56079443 POU4F2 JASPAR yes 55005911
chr17 56079427 56079443 POU4F3 JASPAR yes 55005912
chr17 56079429 56079443 POU4F1 JASPAR yes 55005914
chr17 56079429 56079444 HNF1A JASPAR yes 55005915
chr17 56079430 56079443 HNF1B JASPAR yes 55005916
chr17 56079430 56079444 JUN JASPAR yes 55005917
chr17 56079430 56079444 POU4F1 JASPAR yes 55005918
chr17 56079430 56079446 POU4F3 JASPAR yes 55005919
chr17 56079431 56079452 IRF1 JASPAR yes 55005920
chr17 56079434 56079444 BARHL2 JASPAR yes 55005923
chr17 56079437 56079458 IRF1 JASPAR yes 55005925
chr17 56079439 56079454 PRDM1 JASPAR yes 55005926
chr17 56079440 56079444 YY1 TRANSFAC yes 55005927
Genes associated with rs190556722[chr17:56079443], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More