EnhancerDB
  1. Home
  2. SNP
  3. rs190564166[chr1:178613653]
Enhancers that have rs190564166[chr1:178613653]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178606845 178636895 enh759
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Ovary Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs190564166[chr1:178613653]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178613273 178613817 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21352769
chr1 178613349 178613749 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21352770
chr1 178613391 178613655 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21352771
chr1 178613398 178613688 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21352772
chr1 178613531 178613831 SOX2 GTRD no Neural Stem Cells (H9) 21352774
Genes associated with rs190564166[chr1:178613653], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More