EnhancerDB
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  3. rs190595893[chr17:38668535]
Enhancers that have rs190595893[chr17:38668535]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38663309 38720551 enh17141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs190595893[chr17:38668535]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38667098 38668609 TCF7L2 GTRD no Colon (HCT116) 21754218
chr17 38668012 38668672 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21754319
chr17 38668220 38668880 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21754320
chr17 38668319 38668709 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21754321
chr17 38668321 38668761 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21754322
chr17 38668327 38668643 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21754323
chr17 38668344 38668714 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21754324
chr17 38668369 38668700 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21754325
chr17 38668369 38668709 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21754326
chr17 38668383 38668719 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21754327
chr17 38668392 38668682 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21754328
chr17 38668398 38668762 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21754329
chr17 38668403 38668703 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21754330
chr17 38668471 38668544 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21754331
chr17 38668534 38668554 RREB1 JASPAR yes 54219610
Genes associated with rs190595893[chr17:38668535], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More