EnhancerDB
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  3. rs190644575[chr6:12336807]
Enhancers that have rs190644575[chr6:12336807]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 12317105 12339155 enh23034
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Blood (GM12878) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs190644575[chr6:12336807]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 12336799 12336811 TGIF2 JASPAR yes 99962500
chr6 12336802 12336807 MYC TRANSFAC yes 99962501
chr6 12336804 12336813 NFIX JASPAR yes 99962502
chr6 12336804 12336814 NFIA JASPAR yes 99962503
chr6 12336806 12336812 NFIC JASPAR yes 99962504
Genes associated with rs190644575[chr6:12336807], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More