EnhancerDB
  1. Home
  2. SNP
  3. rs190716335[chr2:228269196]
Enhancers that have rs190716335[chr2:228269196]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 228254625 228287055 enh19284
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs190716335[chr2:228269196]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 228269185 228269198 NFKB2 JASPAR yes 81519463
chr2 228269186 228269196 NFKB1 JASPAR yes 81519464
chr2 228269187 228269197 NFKB1 JASPAR yes 81519465
chr2 228269187 228269197 RELA JASPAR yes 81519466
chr2 228269187 228269197 REL JASPAR yes 81519467
chr2 228269191 228269196 GATA2 JASPAR yes 81519468
Genes associated with rs190716335[chr2:228269196], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More