EnhancerDB
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  3. rs190774988[chr17:55614806]
Enhancers that have rs190774988[chr17:55614806]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55607567 55641035 enh4490
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs190774988[chr17:55614806]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55614802 55614813 HOXC11 JASPAR yes 54966085
chr17 55614802 55614813 HOXC12 JASPAR yes 54966086
chr17 55614802 55614813 HOXC13 JASPAR yes 54966087
chr17 55614803 55614813 HOXC10 JASPAR yes 54966088
chr17 55614803 55614813 HOXD11 JASPAR yes 54966089
chr17 55614806 55614820 FOXF2 JASPAR yes 54966090
chr17 55614806 55614821 FOXP1 JASPAR yes 54966091
Genes associated with rs190774988[chr17:55614806], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More