EnhancerDB
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  3. rs190858908[chr17:64536546]
Enhancers that have rs190858908[chr17:64536546]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 64532553 64550230 enh4536
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
chr17 64536278 64536639 vista25600
VISTA
Transcript factors that have rs190858908[chr17:64536546]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 64535633 64538509 ZNF274 GTRD no Bone Marrow (K562) 108284950
chr17 64536139 64536583 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21781839
chr17 64536139 64536583 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108284951
chr17 64536157 64536827 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108284952
chr17 64536310 64536620 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21781843
chr17 64536310 64536620 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108284957
chr17 64536352 64536628 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108284958
chr17 64536494 64539997 ZBTB33 GTRD no Lung (A549) 21781844
chr17 64536494 64539997 ZBTB33 GTRD no Lung (A549) 108284959
chr17 64536528 64536548 RREB1 JASPAR yes 21277672
chr17 64536528 64536548 RREB1 JASPAR yes 55446155
chr17 64536539 64536559 RREB1 JASPAR yes 21277673
chr17 64536539 64536559 RREB1 JASPAR yes 55446156
chr17 64536546 64536567 ZNF263 JASPAR yes 21277674
chr17 64536546 64536567 ZNF263 JASPAR yes 55446157
Genes associated with rs190858908[chr17:64536546], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More