EnhancerDB
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  3. rs190888001[chr5:77869950]
Enhancers that have rs190888001[chr5:77869950]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77860695 77875975 enh22381
Prostate (PC-3) Liver (HepG2) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Thyroid Uterus Peripheral Blood (MM.1S) Adrenal Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs190888001[chr5:77869950]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77869943 77869958 FOXA1 JASPAR yes 63601554
chr5 77869945 77869957 FOXC2 JASPAR yes 63601556
chr5 77869945 77869958 POU2F2 JASPAR yes 63601557
chr5 77869945 77869959 POU1F1 JASPAR yes 63601558
chr5 77869946 77869957 FOXB1 JASPAR yes 63601559
chr5 77869946 77869957 FOXC1 JASPAR yes 63601560
chr5 77869946 77869958 POU3F1 JASPAR yes 63601561
chr5 77869946 77869958 POU3F2 JASPAR yes 63601562
chr5 77869946 77869959 POU3F3 JASPAR yes 63601563
chr5 77869947 77869951 YY1 TRANSFAC yes 63601564
chr5 77869947 77869958 FOXA1 JASPAR yes 63601565
chr5 77869947 77869959 POU2F1 JASPAR yes 63601566
chr5 77869948 77869957 POU3F4 JASPAR yes 63601567
chr5 77869948 77869957 POU5F1B JASPAR yes 63601568
chr5 77869949 77869957 FOXL1 JASPAR yes 63601569
chr5 77869950 77869961 NFIL3 JASPAR yes 63601570
Genes associated with rs190888001[chr5:77869950], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More