EnhancerDB
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  3. rs190920958[chr1:205289384]
Enhancers that have rs190920958[chr1:205289384]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205280105 205289755 enh12590
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Heart
Transcript factors that have rs190920958[chr1:205289384]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205289368 205289388 RREB1 JASPAR yes 34754816
chr1 205289373 205289393 RREB1 JASPAR yes 34754819
chr1 205289374 205289395 IRF1 JASPAR yes 34754820
chr1 205289376 205289391 STAT2 JASPAR yes 34754821
chr1 205289377 205289391 STAT1 JASPAR yes 34754822
chr1 205289378 205289390 IRF1 JASPAR yes 34754823
chr1 205289378 205289392 IRF7 JASPAR yes 34754824
chr1 205289378 205289393 IRF9 JASPAR yes 34754825
chr1 205289378 205289398 RREB1 JASPAR yes 34754826
chr1 205289379 205289400 IRF1 JASPAR yes 34754827
chr1 205289383 205289395 IRF1 JASPAR yes 34754828
chr1 205289383 205289403 RREB1 JASPAR yes 34754829
chr1 205289384 205289405 IRF1 JASPAR yes 34754830
Genes associated with rs190920958[chr1:205289384], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More