EnhancerDB
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  3. rs190939576[chr12:46941170]
Enhancers that have rs190939576[chr12:46941170]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46935165 46958895 enh14680
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs190939576[chr12:46941170]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46940512 46941172 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21542282
chr12 46941163 46941177 POU4F1 JASPAR yes 120636018
chr12 46941164 46941180 POU4F2 JASPAR yes 120636019
chr12 46941164 46941180 POU4F3 JASPAR yes 120636020
chr12 46941165 46941175 PAX7 JASPAR yes 120636021
chr12 46941166 46941170 YY1 TRANSFAC yes 120636022
chr12 46941166 46941180 POU4F1 JASPAR yes 120636023
chr12 46941166 46941181 HNF1A JASPAR yes 120636024
chr12 46941167 46941177 LHX6 JASPAR yes 120636025
chr12 46941167 46941177 MNX1 JASPAR yes 120636026
chr12 46941167 46941177 POU6F1 JASPAR yes 120636027
chr12 46941167 46941180 HNF1B JASPAR yes 120636028
chr12 46941168 46941176 LMX1A JASPAR yes 120636029
chr12 46941168 46941176 LMX1B JASPAR yes 120636030
chr12 46941168 46941176 NKX6-1 JASPAR yes 120636031
chr12 46941168 46941176 NKX6-2 JASPAR yes 120636032
chr12 46941168 46941176 VAX1 JASPAR yes 120636033
chr12 46941168 46941176 VAX2 JASPAR yes 120636034
chr12 46941168 46941176 VSX1 JASPAR yes 120636035
chr12 46941168 46941176 VSX2 JASPAR yes 120636036
Genes associated with rs190939576[chr12:46941170], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More