EnhancerDB
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  3. rs190985726[chr17:43452387]
Enhancers that have rs190985726[chr17:43452387]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43440002 43455235 enh17189
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Ovary Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs190985726[chr17:43452387]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43451478 43452564 TCF7L2 GTRD no Colon (HCT116) 21765586
chr17 43451797 43452784 TCF7L2 GTRD no Colon (HCT116) 21765589
chr17 43452382 43452395 ZBTB18 JASPAR yes 54450357
chr17 43452384 43452393 SNAI2 JASPAR yes 54450358
chr17 43452384 43452394 FIGLA JASPAR yes 54450359
chr17 43452384 43452394 ID4 JASPAR yes 54450360
chr17 43452384 43452394 TCF3 JASPAR yes 54450361
chr17 43452384 43452394 TCF4 JASPAR yes 54450362
chr17 43452386 43452395 ZEB1 JASPAR yes 54450363
Genes associated with rs190985726[chr17:43452387], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More