EnhancerDB
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  3. rs191516452[chr17:27972168]
Enhancers that have rs191516452[chr17:27972168]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 27963570 27975125 enh4328
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs191516452[chr17:27972168]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 27972159 27972170 FOXH1 JASPAR yes 53745158
chr17 27972159 27972170 HOXA10 JASPAR yes 53745159
chr17 27972160 27972169 CDX1 JASPAR yes 53745160
chr17 27972160 27972170 HOXA13 JASPAR yes 53745161
chr17 27972161 27972173 FOXI1 JASPAR yes 53745162
chr17 27972163 27972171 FOXG1 JASPAR yes 53745163
Genes associated with rs191516452[chr17:27972168], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More