EnhancerDB
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Enhancers that have rs191871188[chr19:13144367]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13138760 13157647 enh17929
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs191871188[chr19:13144367]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13143925 13144920 TCF7L2 GTRD no Colon (HCT116) 21850223
chr19 13143925 13144920 TCF7L2 GTRD no Colon (HCT116) 108387575
chr19 13143942 13144975 ZNF143 GTRD no Epithelial (MCF-7) 21850224
chr19 13143942 13144975 ZNF143 GTRD no Epithelial (MCF-7) 108387576
chr19 13144034 13145543 TCF7L2 GTRD no Colon (HCT116) 21850225
chr19 13144034 13145543 TCF7L2 GTRD no Colon (HCT116) 108387577
chr19 13144039 13144886 ZNF143 GTRD no Epithelial (MCF-7) 21850226
chr19 13144039 13144886 ZNF143 GTRD no Epithelial (MCF-7) 108387578
chr19 13144064 13145064 TCF7L2 GTRD no Colon (HCT116) 21850227
chr19 13144064 13145064 TCF7L2 GTRD no Colon (HCT116) 108387579
chr19 13144089 13144889 TCF7L2 GTRD no Colon (HCT116) 21850228
chr19 13144089 13144889 TCF7L2 GTRD no Colon (HCT116) 108387580
chr19 13144122 13145006 ZNF143 GTRD no Epithelial (MCF-7) 21850229
chr19 13144122 13145006 ZNF143 GTRD no Epithelial (MCF-7) 108387581
chr19 13144130 13144850 ZNF143 GTRD no Epithelial (MCF-7) 21850230
chr19 13144130 13144850 ZNF143 GTRD no Epithelial (MCF-7) 108387582
chr19 13144280 13144884 ZNF274 GTRD no Blood (GM12878) 108387583
chr19 13144363 13144367 H1TF2 TRANSFAC yes 112502961
chr19 13144363 13144367 NFE TRANSFAC yes 112502962
chr19 13144363 13144367 SRF TRANSFAC yes 112502963
chr19 13144367 13144370 MYB TRANSFAC yes 112502964
Genes associated with rs191871188[chr19:13144367], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More