EnhancerDB
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  3. rs192255680[chr17:56075315]
Enhancers that have rs192255680[chr17:56075315]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 56068785 56080363 enh4497
Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs192255680[chr17:56075315]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56075301 56075321 TP63 JASPAR yes 55005267
chr17 56075304 56075317 SMAD2 JASPAR yes 55005268
chr17 56075307 56075317 TBR1 JASPAR yes 55005269
chr17 56075308 56075318 TBX21 JASPAR yes 55005270
chr17 56075309 56075317 MGA JASPAR yes 55005271
chr17 56075309 56075317 TBX15 JASPAR yes 55005272
chr17 56075309 56075317 TBX1 JASPAR yes 55005273
chr17 56075309 56075317 TBX4 JASPAR yes 55005274
chr17 56075309 56075317 TBX5 JASPAR yes 55005275
chr17 56075309 56075318 ZEB1 JASPAR yes 55005276
chr17 56075309 56075322 ZBTB18 JASPAR yes 55005277
chr17 56075310 56075320 FIGLA JASPAR yes 55005278
chr17 56075310 56075320 ID4 JASPAR yes 55005279
chr17 56075310 56075320 TCF3 JASPAR yes 55005280
chr17 56075310 56075320 TCF4 JASPAR yes 55005281
chr17 56075311 56075320 SNAI2 JASPAR yes 55005282
chr17 56075312 56075317 USF2 TRANSFAC yes 55005283
Genes associated with rs192255680[chr17:56075315], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More