EnhancerDB
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  3. rs192371641[chr1:19274652]
Enhancers that have rs192371641[chr1:19274652]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19252691 19280920 enh11566
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs192371641[chr1:19274652]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19274191 19275379 TCF7L2 GTRD no Colon (HCT116) 107802287
chr1 19274638 19274652 SPI1 JASPAR yes 27164956
chr1 19274638 19274652 SPIC JASPAR yes 27164957
chr1 19274641 19274652 ELF5 JASPAR yes 27164958
chr1 19274641 19274652 ETV2 JASPAR yes 27164959
chr1 19274642 19274652 ELK3 JASPAR yes 27164960
chr1 19274642 19274652 ETV1 JASPAR yes 27164961
chr1 19274642 19274652 ETV4 JASPAR yes 27164962
chr1 19274642 19274652 FEV JASPAR yes 27164963
chr1 19274650 19274654 YY1 TRANSFAC yes 27164966
Genes associated with rs192371641[chr1:19274652], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More