EnhancerDB
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  3. rs192388300[chr1:225883714]
Enhancers that have rs192388300[chr1:225883714]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225875685 225891098 enh12722
Liver Astrocyte Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs192388300[chr1:225883714]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225881029 225884387 ZNF274 GTRD no Cervix (HeLa-S3) 21385320
chr1 225881029 225884387 ZNF274 GTRD no Cervix (HeLa-S3) 107874733
chr1 225881185 225884290 TCF7L2 GTRD no Colon (HCT116) 107874740
chr1 225881349 225884207 TCF7L2 GTRD no Colon (HCT116) 107874748
chr1 225881454 225884242 TCF7L2 GTRD no Colon (HCT116) 107874761
chr1 225881542 225884008 ZNF143 GTRD no Epithelial (MCF-7) 21385332
chr1 225881542 225884008 ZNF143 GTRD no Epithelial (MCF-7) 107874771
chr1 225883645 225883935 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21385423
chr1 225883695 225884396 ZNF143 GTRD no Epithelial (MCF-7) 21385424
chr1 225883701 225883714 POU3F3 JASPAR yes 35762849
chr1 225883701 225883716 FOXA1 JASPAR yes 35762850
chr1 225883702 225883714 FOXI1 JASPAR yes 35762851
chr1 225883702 225883714 POU3F1 JASPAR yes 35762852
chr1 225883702 225883839 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21385425
chr1 225883703 225883714 FOXP2 JASPAR yes 35762854
chr1 225883703 225883715 FOXC2 JASPAR yes 35762855
chr1 225883704 225883715 FOXB1 JASPAR yes 35762857
chr1 225883704 225883715 FOXC1 JASPAR yes 35762858
chr1 225883705 225883716 FOXA1 JASPAR yes 35762859
chr1 225883705 225883721 RFX2 JASPAR yes 35762860
chr1 225883705 225883721 RFX3 JASPAR yes 35762861
chr1 225883705 225883721 RFX5 JASPAR yes 35762862
chr1 225883706 225884469 ZNF274 GTRD no Liver (HepG2) 21385426
chr1 225883708 225884551 ZNF143 GTRD no Epithelial (MCF-7) 21385427
Genes associated with rs192388300[chr1:225883714], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More