EnhancerDB
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  3. rs192393347[chr17:55965322]
Enhancers that have rs192393347[chr17:55965322]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55962618 55979623 enh17245
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Colon (HCT116) Uterus Thyroid Adrenal Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs192393347[chr17:55965322]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55965317 55965327 SREBF1 JASPAR yes 54995206
chr17 55965317 55965327 SREBF2 JASPAR yes 54995207
chr17 55965322 55965330 NR4A2 JASPAR yes 54995208
Genes associated with rs192393347[chr17:55965322], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 56080721 56084707 - SRSF1 ENSG00000136450.8 56084707 115399 Esophagus 0.124606 16078