EnhancerDB
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  3. rs192653606[chr1:28753775]
Enhancers that have rs192653606[chr1:28753775]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28732865 28757735 enh186
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs192653606[chr1:28753775]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28753765 28753778 SMAD2 JASPAR yes 27770320
chr1 28753768 28753778 TBR1 JASPAR yes 27770321
chr1 28753769 28753779 TBX21 JASPAR yes 27770322
chr1 28753770 28753778 MGA JASPAR yes 27770323
chr1 28753770 28753778 TBX15 JASPAR yes 27770324
chr1 28753770 28753778 TBX1 JASPAR yes 27770325
chr1 28753770 28753778 TBX4 JASPAR yes 27770326
chr1 28753770 28753778 TBX5 JASPAR yes 27770327
chr1 28753770 28753779 ZEB1 JASPAR yes 27770328
chr1 28753770 28753782 PKNOX1 JASPAR yes 27770329
chr1 28753770 28753782 TGIF1 JASPAR yes 27770330
chr1 28753770 28753783 ZBTB18 JASPAR yes 27770331
chr1 28753771 28753781 FIGLA JASPAR yes 27770332
chr1 28753771 28753781 ID4 JASPAR yes 27770333
chr1 28753771 28753781 TCF3 JASPAR yes 27770334
chr1 28753771 28753781 TCF4 JASPAR yes 27770335
chr1 28753772 28753781 SNAI2 JASPAR yes 27770336
chr1 28753773 28753778 USF2 TRANSFAC yes 27770337
Genes associated with rs192653606[chr1:28753775], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More