EnhancerDB
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  3. rs192672558[chr12:50930629]
Enhancers that have rs192672558[chr12:50930629]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs192672558[chr12:50930629]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50930616 50930635 PITX2 TRANSFAC yes 120840118
chr12 50930622 50930635 ZBTB18 JASPAR yes 120840119
chr12 50930623 50930635 PKNOX1 JASPAR yes 120840120
chr12 50930623 50930635 TGIF1 JASPAR yes 120840121
chr12 50930624 50930633 SNAI2 JASPAR yes 120840122
chr12 50930624 50930634 FIGLA JASPAR yes 120840123
chr12 50930624 50930634 ID4 JASPAR yes 120840124
chr12 50930624 50930634 TCF3 JASPAR yes 120840125
chr12 50930624 50930634 TCF4 JASPAR yes 120840126
chr12 50930626 50930635 ZEB1 JASPAR yes 120840127
chr12 50930626 50930636 TBX21 JASPAR yes 120840128
chr12 50930627 50930635 MGA JASPAR yes 120840129
chr12 50930627 50930635 TBX15 JASPAR yes 120840130
chr12 50930627 50930635 TBX1 JASPAR yes 120840131
chr12 50930627 50930635 TBX4 JASPAR yes 120840132
chr12 50930627 50930635 TBX5 JASPAR yes 120840133
chr12 50930627 50930637 TBR1 JASPAR yes 120840134
chr12 50930627 50930640 SMAD2 JASPAR yes 120840135
Genes associated with rs192672558[chr12:50930629], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More