EnhancerDB
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  3. rs193004139[chr17:34220188]
Enhancers that have rs193004139[chr17:34220188]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 34213485 34236135 enh17119
Skin (Keratinocyte) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
chr17 34219582 34220299 vista24547
VISTA
Transcript factors that have rs193004139[chr17:34220188]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 34219657 34221401 TEF1 GTRD no Bone (Osteoblast) 21751093
chr17 34219657 34221401 TEF1 GTRD no Bone (Osteoblast) 108251385
chr17 34220178 34220189 E2F6 JASPAR yes 21226177
chr17 34220178 34220189 E2F6 JASPAR yes 54019870
chr17 34220187 34220199 PBX1 JASPAR yes 21226178
chr17 34220187 34220199 PBX1 JASPAR yes 54019871
chr17 34220188 34220193 GATA2 JASPAR yes 21226179
chr17 34220188 34220193 GATA2 JASPAR yes 54019872
Genes associated with rs193004139[chr17:34220188], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More