EnhancerDB
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  3. rs193088986[chr1:225650076]
Enhancers that have rs193088986[chr1:225650076]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225626185 225658051 enh950
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs193088986[chr1:225650076]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225650075 225650086 HOXA10 JASPAR yes 35743496
chr1 225650076 225650085 CDX1 JASPAR yes 35743497
chr1 225650076 225650086 HOXA13 JASPAR yes 35743498
chr1 225650076 225650086 HOXB13 JASPAR yes 35743499
chr1 225650076 225650086 HOXD13 JASPAR yes 35743500
Genes associated with rs193088986[chr1:225650076], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More