EnhancerDB
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Enhancers that have rs193179878[chr1:235247366]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235240345 235251255 enh12800
Brain (SK-N-MC) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs193179878[chr1:235247366]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235246809 235247405 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885884
chr1 235246850 235247370 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885886
chr1 235246904 235247500 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21403581
chr1 235246907 235247523 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21403582
chr1 235246947 235247417 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21403583
chr1 235246980 235247436 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21403584
chr1 235246981 235247445 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21403585
chr1 235247003 235247399 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21403586
chr1 235247003 235247403 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21403587
chr1 235247022 235247398 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21403588
chr1 235247036 235247396 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21403590
chr1 235247070 235247614 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21403598
chr1 235247079 235247389 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21403599
chr1 235247092 235247512 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21403601
chr1 235247365 235247380 HSF1 JASPAR yes 36349745
Genes associated with rs193179878[chr1:235247366], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More