EnhancerDB
  1. Home
  2. SNP
  3. rs193259394[chr1:27477740]
Enhancers that have rs193259394[chr1:27477740]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27456674 27477960 enh171
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs193259394[chr1:27477740]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27477733 27477745 PKNOX1 JASPAR yes 27682559
chr1 27477733 27477745 PKNOX2 JASPAR yes 27682560
chr1 27477733 27477745 TGIF1 JASPAR yes 27682561
chr1 27477733 27477745 TGIF2 JASPAR yes 27682562
chr1 27477734 27477744 MSC JASPAR yes 27682563
chr1 27477734 27477744 MYF6 JASPAR yes 27682564
chr1 27477738 27477746 MEIS2 JASPAR yes 27682565
chr1 27477738 27477746 MEIS3 JASPAR yes 27682566
chr1 27477739 27477743 NFE TRANSFAC yes 27682567
Genes associated with rs193259394[chr1:27477740], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More