EnhancerDB
  1. Home
  2. SNP
  3. rs1948425[chr12:46778881]
Enhancers that have rs1948425[chr12:46778881]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46774225 46791355 enh14675
Brain (SK-N-MC) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Esophagus Placenta Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs1948425[chr12:46778881]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46778341 46778905 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21541229
chr12 46778411 46778941 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541230
chr12 46778559 46778943 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541234
chr12 46778802 46779009 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541235
chr12 46778802 46779178 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541236
chr12 46778806 46779146 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541237
chr12 46778825 46779145 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541238
chr12 46778876 46778887 HOXC12 JASPAR yes 120613530
chr12 46778876 46778976 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541239
chr12 46778877 46778887 HOXD11 JASPAR yes 120613531
chr12 46778880 46778894 SPI1 JASPAR yes 120613532
chr12 46778880 46778894 SPIC JASPAR yes 120613533
chr12 46778881 46778894 ELF1 JASPAR yes 120613534
Genes associated with rs1948425[chr12:46778881], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More