EnhancerDB
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  3. rs1962047[chr12:58292707]
Enhancers that have rs1962047[chr12:58292707]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 58279727 58295915 enh2398
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs1962047[chr12:58292707]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 58292630 58293260 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21551678
chr12 58292638 58293123 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21551679
chr12 58292644 58293234 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21551680
chr12 58292648 58293178 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21551681
chr12 58292654 58293170 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21551682
chr12 58292667 58293051 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21551683
chr12 58292689 58293099 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21551684
chr12 58292694 58292990 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21551685
chr12 58292700 58292718 IRF2 JASPAR yes 121148817
chr12 58292706 58292716 HOXA13 JASPAR yes 121148818
chr12 58292706 58292716 HOXB13 JASPAR yes 121148819
chr12 58292706 58292716 HOXD13 JASPAR yes 121148820
chr12 58292706 58292717 HOXA10 JASPAR yes 121148821
chr12 58292707 58292716 CDX1 JASPAR yes 121148822
chr12 58292707 58292718 CDX2 JASPAR yes 121148823
Genes associated with rs1962047[chr12:58292707], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More