EnhancerDB
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  3. rs196952[chr17:62158300]
Enhancers that have rs196952[chr17:62158300]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62157225 62175223 enh17290
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs196952[chr17:62158300]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62158295 62158312 RARA JASPAR yes 55274978
chr17 62158295 62158312 RXRA JASPAR yes 55274979
chr17 62158297 62158307 BHLHE40 JASPAR yes 55274980
chr17 62158297 62158307 MLXIPL JASPAR yes 55274981
chr17 62158297 62158307 MLX JASPAR yes 55274982
chr17 62158299 62158304 MYC TRANSFAC yes 55274983
chr17 62158299 62158304 USF1 TRANSFAC yes 55274984
chr17 62158299 62158304 USF2 TRANSFAC yes 55274985
Genes associated with rs196952[chr17:62158300], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More