EnhancerDB
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  3. rs196953[chr17:62158319]
Enhancers that have rs196953[chr17:62158319]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62157225 62175223 enh17290
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs196953[chr17:62158319]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62158308 62158321 POU2F2 JASPAR yes 55274987
chr17 62158308 62158322 POU1F1 JASPAR yes 55274988
chr17 62158309 62158321 POU3F1 JASPAR yes 55274989
chr17 62158309 62158322 POU3F3 JASPAR yes 55274990
chr17 62158316 62158320 YY1 TRANSFAC yes 55274991
Genes associated with rs196953[chr17:62158319], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More