EnhancerDB
  1. Home
  2. SNP
  3. rs196955[chr17:62158716]
Enhancers that have rs196955[chr17:62158716]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62157225 62175223 enh17290
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs196955[chr17:62158716]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62158716 62158720 TEAD2 TRANSFAC yes 55275043
chr17 62158716 62158721 TBP TRANSFAC yes 55275044
chr17 62158716 62158722 TFIID TRANSFAC yes 55275045
Genes associated with rs196955[chr17:62158716], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More