EnhancerDB
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  3. rs1969799[chr1:27477852]
Enhancers that have rs1969799[chr1:27477852]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27456674 27477960 enh171
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs1969799[chr1:27477852]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27477835 27477856 IRF1 JASPAR yes 27682610
chr1 27477841 27477856 FOXP1 JASPAR yes 27682612
chr1 27477842 27477854 FOXC2 JASPAR yes 27682613
chr1 27477847 27477862 FOXP1 JASPAR yes 27682615
chr1 27477849 27477865 POU4F3 JASPAR yes 27682616
chr1 27477850 27477865 FOXA1 JASPAR yes 27682617
chr1 27477851 27477863 FOXI1 JASPAR yes 27682618
chr1 27477851 27477865 POU4F1 JASPAR yes 27682619
chr1 27477851 27477866 FOXP1 JASPAR yes 27682620
chr1 27477851 27477866 HNF1A JASPAR yes 27682621
chr1 27477852 27477864 FOXC2 JASPAR yes 27682622
chr1 27477852 27477866 ONECUT2 JASPAR yes 27682623
chr1 27477852 27477866 ONECUT3 JASPAR yes 27682624
Genes associated with rs1969799[chr1:27477852], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More