EnhancerDB
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  3. rs1970168[chr1:232761116]
Enhancers that have rs1970168[chr1:232761116]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232744026 232773755 enh12786
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Lung Muscle (A673) Heart
Transcript factors that have rs1970168[chr1:232761116]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232761103 232761120 RARA JASPAR yes 36178935
chr1 232761113 232761124 TBX2 JASPAR yes 36178936
chr1 232761113 232761126 EOMES JASPAR yes 36178937
chr1 232761114 232761124 TBR1 JASPAR yes 36178938
chr1 232761115 232761124 NFIX JASPAR yes 36178939
chr1 232761115 232761125 NFIA JASPAR yes 36178940
Genes associated with rs1970168[chr1:232761116], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 232533711 232697304 - SIPA1L2 ENSG00000116991.6 232697304 63812 Esophagus 0.00435937 1955