EnhancerDB
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  3. rs1971539[chr3:149362878]
Enhancers that have rs1971539[chr3:149362878]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 149341585 149368662 enh21023
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs1971539[chr3:149362878]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 149362866 149362881 FOXP1 JASPAR yes 6518949
chr3 149362867 149362879 FOXC2 JASPAR yes 6518950
chr3 149362870 149362885 FOXP1 JASPAR yes 6518952
chr3 149362871 149362886 FOXP1 JASPAR yes 6518953
chr3 149362872 149362887 FOXP1 JASPAR yes 6518954
Genes associated with rs1971539[chr3:149362878], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More