EnhancerDB
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  3. rs1980772[chr6:33568759]
Enhancers that have rs1980772[chr6:33568759]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 33549445 33581115 enh23159
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs1980772[chr6:33568759]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 33568755 33568765 HMBOX1 JASPAR yes 101159469
chr6 33568757 33568760 MYB TRANSFAC yes 101159470
chr6 33568759 33568768 PITX3 JASPAR yes 101159471
chr6 33568759 33568769 GSC2 JASPAR yes 101159472
Genes associated with rs1980772[chr6:33568759], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More